JBEI
Browse the public JBEI registry of synthetic biological parts hosted by TeselaGen.
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Registry Entries(12,525)
← All institutions| ICE ID | Name | Type | Description |
|---|---|---|---|
| JPUB_027984 | JBEI-258765 | STRAIN | S. coelicolor M1152 base strain |
| JPUB_027982 | JBEI-258764 | STRAIN | S. coelicolor M1152 base strain |
| JPUB_027980 | JBEI-258763 | STRAIN | S. coelicolor M1152 base strain |
| JPUB_027978 | JBEI-258762 | STRAIN | S. coelicolor M1152 base strain |
| JPUB_027976 | JBEI-258761 | STRAIN | S. coelicolor M1152 base strain |
| JPUB_027974 | JBEI-258760 | STRAIN | S. coelicolor M1152 base strain |
| JPUB_027972 | JBEI-258759 | STRAIN | S. coelicolor M1152 base strain |
| JPUB_027970 | JBEI-258758 | STRAIN | S. coelicolor M1152 base strain |
| JPUB_027968 | JBEI-258757 | STRAIN | S. venezuelae ATCC 15439 base strain |
| JPUB_027965 | JBEI-258756 | STRAIN | S. coelicolor M1152 base strain |
| JPUB_027961 | JBEI-258755 | STRAIN | S. coelicolor M1152 base strain |
| JPUB_027959 | JBEI-258754 | STRAIN | S. coelicolor M1152 base strain |
| JPUB_027957 | JBEI-258753 | STRAIN | S. coelicolor M1152 base strain |
| JPUB_027955 | JBEI-258752 | STRAIN | S. coelicolor M1152 base strain |
| JPUB_024310 | JBEI-258731 | STRAIN | S. albus J1074 strain carrying pSC_rimA0 and p41_rimB51. |
| JPUB_024309 | JBEI-258730 | STRAIN | S. albus J1074 strain carrying pSC_rimA0 and p41_rimB42. |
| JPUB_024308 | JBEI-258729 | STRAIN | S. albus J1074 strain carrying pSC_rimA0, p41_rimB67, pOSV807_fkbS and pOSV809_TA1. |
| JPUB_024307 | JBEI-258728 | STRAIN | S. albus J1074 strain carrying pSC_rimA0 and p41_rimB18. |
| JPUB_024305 | JBEI-258727 | STRAIN | E. coli XL1Blue harboring pHIS plasmid carrying rimM1 ACP gene. |
| JPUB_024304 | JBEI-258725 | STRAIN | E. coli XL1Blue harboring Streptomyces integration plasmid pOSV809 carrying Pgapdh(EL)-yjgB and Pgapdh(EL)-MmCAR. |
| JPUB_024303 | JBEI-258724 | STRAIN | E. coli XL1Blue harboring Streptomyces integration plasmid pOSV809 carrying Pgapdh(EL)-yjgB and Pgapdh(EL)-SrCAR. |
| JPUB_024302 | JBEI-258723 | STRAIN | E. coli XL1Blue harboring Streptomyces integration plasmid pOSV809 carrying Pgapdh(EL)-yjgB and Pgapdh(EL)-MaCAR. |
| JPUB_024301 | JBEI-258722 | STRAIN | E. coli XL1Blue harboring Streptomyces integration plasmid pOSV809 carrying Pgapdh(EL)-yahK and Pgapdh(EL)-MmCAR. |
| JPUB_024300 | JBEI-258721 | STRAIN | E. coli XL1Blue harboring Streptomyces integration plasmid pOSV809 carrying Pgapdh(EL)-yahK and Pgapdh(EL)-SrCAR. |
| JPUB_024299 | JBEI-258720 | STRAIN | E. coli XL1Blue harboring Streptomyces integration plasmid pOSV809 carrying Pgapdh(EL)-yahK and Pgapdh(EL)-MaCAR. |
| JPUB_024298 | JBEI-258719 | STRAIN | E. coli XL1Blue harboring Streptomyces integration plasmid pOSV809 carrying Pgapdh(EL)-MaCAR. |
| JPUB_024296 | JBEI-258718 | STRAIN | E. coli XL1Blue harboring Streptomyces integration plasmid p41 carrying Pgapdh(EL)-rimM13(M1 KS)-TR2. |
| JPUB_024294 | JBEI-258717 | STRAIN | E. coli XL1Blue harboring Streptomyces integration plasmid p41 carrying Pgapdh(EL)-rimM13(M1 docking domain)-TR2. |
| JPUB_024293 | JBEI-258716 | STRAIN | E. coli XL1Blue harboring Streptomyces integration plasmid p41 carrying Pgapdh(EL)-rimM1(M13 AT)-TR2. |
| JPUB_024292 | JBEI-258715 | STRAIN | E. coli XL1Blue harboring Streptomyces integration plasmid p41 carrying Pgapdh(EL)-rimM1(M13 AT)-Rim TE. |
| JPUB_024291 | JBEI-258714 | STRAIN | E. coli XL1Blue harboring Streptomyces integration plasmid p41 carrying Pgapdh(EL)-rimM1(M13 AT)-Pik TE. |
| JPUB_024290 | JBEI-258713 | STRAIN | E. coli XL1Blue harboring Streptomyces integration plasmid p41 carrying Pgapdh(EL)-rimM1(M13 AT)-DEBS TE. |
| JPUB_026727 | JBEI-258702 | STRAIN | BW25113 (with DE3 complement enabling use of T7 promoters). . . First plasmid encodes flaviolin-producing type III PKS, as reported in Incha MR, Thompson MG, Blake-Hedges JM, Liu Y, Pearson AN, Schmidt M, Gin JW, Petzold CJ, Deutschbauer AM, Keasling JD. 2020. Leveraging host metabolism for bisdemethoxycurcumin production in Pseudomonas putida. Metab. Eng. Comm. 10: e00119. . . The second plasmid encodes C. necator hydrogenase “HYD (Kan:P15A)”, as reported in Bertrand et al. 2024a [Title TBD] Manuscript in preparation. . . Strain is robustly functional in my hands, and performs the following reactions:. . 5 malonyl-CoA + O2 = Flaviolin. H2 + NAD+ = H+ + NADH. . For best practices, please request plates. |
| JPUB_026719 | JBEI-258701 | STRAIN | BW25113 (with DE3 complement enabling use of T7 promoters). . . First plasmid encodes acetoacetyl-CoA thiolase, HMG-CoA synthase, and HMG-CoA reductase, to enable the NADH-dependent production of mevalonate. Plasmid contains low-copy SC101 origin and was derived from the P15A variant originally created by Kang A, Mendez-Perez D, Goh EB, Baidoo EEK, Benites VT, Beller HR, Keasling JD, Adams PD, Mukhopadhyay A, Lee TS. 2019. Optimization of the IPP-bypass mevalonate pathway and fed-batch fermentation for the production of isoprenol in Escherichia coli. Metab. Eng. 56: 85-96. . . Second plasmid encodes the C. necator hydrogenase plasmid “HYD (Spec:P15A)”, as described in Bertrand et al. 2024b [Title TBD] Manuscript in preparation. . . Strain is robustly functional in my hands, and performs the following reactions:. H2 + NAD+ = H+ + NADH. 3Acetate + 2NADH = Mevalonate + CO2. . For best practice, please request plates. |
| JPUB_026715 | JBEI-258690 | STRAIN | BW25113 (with DE3 complement enabling use of T7 promoters), containing C. necator hydrogenase plasmid “HYD (Kan:P15A)”, IPTG inducible, as described in Bertrand et al. 2024b [Title TBD] Manuscript in preparation. . . Strain is robustly functional in my hands, and performs the following reaction:. H2 + NAD+ = H+ + NADH . . For best practice, please request plates. |
| JPUB_026714 | JBEI-258683 | STRAIN | Untransformed BW25113 (with DE3 complement enabling use of T7 Promoters). Used for functional heterologous expression studies. |
| JPUB_026713 | JBEI-258645 | STRAIN | Faithful reconstruction of arabinose-inducible plasmid for heterologous expression of C. necator hydrogenase heterotetramer (HoxFUYH) and maturation proteins (HoxWI and HypA2B2R2) in E. coli, as originally reported by Ghosh, Bisaillon, Hallenbeck. 2013. Increasing the metabolic capacity of Escherichia coli for hydrogen production through heterologous expression of the Ralstonia eutropha SH operon. Biotechnol. Biofuels 6: 122. Plasmid is contained within Stellar E. coli (Takara) cloning strain. Plasmid miniprep and transformation into end-user’s desired strain of bacteria will be required to achieve the described application. |
| JPUB_026712 | JBEI-258644 | STRAIN | Low copy IPTG-inducible production of mevalonate via NADPH-specific pathway when expressed in E. coli. Encodes acetoacetyl-CoA thiolase, HMG-CoA synthase, and HMG-CoA reductase. Plasmid is contained within Stellar E. coli (Takara) cloning strain. Plasmid miniprep and transformation into end-user’s desired strain of bacteria will be required to achieve the described application. |
| JPUB_026711 | JBEI-258643 | STRAIN | Medium copy IPTG-inducible production of mevalonate via NADPH-specific pathway when expressed in E. coli. Encodes acetoacetyl-CoA thiolase, HMG-CoA synthase, and HMG-CoA reductase. Plasmid is contained within Stellar E. coli (Takara) cloning strain. Plasmid miniprep and transformation into end-user’s desired strain of bacteria will be required to achieve the described application. |
| JPUB_026710 | JBEI-258642 | STRAIN | High copy IPTG-inducible production of mevalonate via NADPH-specific pathway when expressed in E. coli. Encodes acetoacetyl-CoA thiolase, HMG-CoA synthase, and HMG-CoA reductase. Plasmid is contained within Stellar E. coli (Takara) cloning strain. Plasmid miniprep and transformation into end-user’s desired strain of bacteria will be required to achieve the described application. |
| JPUB_026176 | JBEI-258305 | STRAIN | Strain containing plasmid encoding a gRNA sequence for PP_4264. TEAM 2720 |
| JPUB_026174 | JBEI-258303 | STRAIN | Strain containing plasmid encoding a gRNA sequence for PP_2037. TEAM 4000 |
| JPUB_026172 | JBEI-258301 | STRAIN | Strain containing plasmid encoding a gRNA sequence for PP_0988. TEAM 3999 |
| JPUB_024288 | JBEI-258152 | STRAIN | S. albus J1074 strain carrying pSC_rimA0, p41_rimB40, pOSV809_yjgB_MmCAR, and pOSV807_FkbS. |
| JPUB_024286 | JBEI-258151 | STRAIN | S. albus J1074 strain carrying pSC_rimA0, p41_rimB40, pOSV809_yjgB_SrCAR, and pOSV807_FkbS. |
| JPUB_024284 | JBEI-258150 | STRAIN | S. albus J1074 strain carrying pSC_rimA0, p41_rimB40, pOSV809_yjgB_MaCAR, and pOSV807_FkbS. |
| JPUB_024282 | JBEI-258149 | STRAIN | S. albus J1074 strain carrying pSC_rimA0, p41_rimB40, pOSV809_yahK_MmCAR, and pOSV807_FkbS. |
| JPUB_024280 | JBEI-258148 | STRAIN | S. albus J1074 strain carrying pSC_rimA0, p41_rimB40, pOSV809_yahK_SrCAR, and pOSV807_FkbS. |
| JPUB_024278 | JBEI-258147 | STRAIN | S. albus J1074 strain carrying pSC_rimA0, p41_rimB40, pOSV809_yahK_MaCAR, and pOSV807_FkbS. |
| JPUB_024276 | JBEI-258146 | STRAIN | S. albus J1074 strain carrying pSC_rimA0 and p41_rimB75. |